Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14761g00001 ATGAACAATCTCCTTGGAGAGGAAAGGGAGCAATATCAGAAAAAGAGGAAATCATGTGATGAAGCCACTACAAACTTGAGGACATCAAGGAGAAGATTATGCAACAACAAAAATGAAGAAGATGGACACAACTATAACAAATCAGTCTCTACAACACTAAAGCTTTATGATGATCCGTGGAAGATCAAAAAGACGCTAACCGACAGTGATCTAGGAATCTTGAGCAGACTCTTGTTAGCTGCAGACTTGGTGAAGAAACAAATTTTGCCTATGTTGGATCTTGATAACGCAAGAGCTGCAGAGACCGAGGAAGGATCCCCGGTCAATGTTTGGGACATGGAAACAAATTCCATGCACCAACTTGTTCTAAAGCGTTGGTCTTCGTCCAAGAGTTATGTTCTTATTGGTAAGTGGAACCATGATTTCGTGAGAAGAAGAGATCTCAAGAAAGGAGATGAAATTGGATTTCAATGGGATCCTTTTAACCGCGCTTTCAATTTCTGTGTTCTTAAACGGGCTACCACGCCTCAATAA 534 0.4082 MNNLLGEEREQYQKKRKSCDEATTNLRTSRRRLCNNKNEEDGHNYNKSVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLDLDNARAAETEEGSPVNVWDMETNSMHQLVLKRWSSSKSYVLIGKWNHDFVRRRDLKKGDEIGFQWDPFNRAFNFCVLKRATTPQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14761g00001 177 SUPERFAMILY DNA-binding pseudobarrel domain 58 168 IPR015300 -
Trme14761g00001 177 Gene3D - 59 175 IPR015300 -
Trme14761g00001 177 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 33 174 - -
Trme14761g00001 177 MobiDBLite consensus disorder prediction 8 24 - -
Trme14761g00001 177 CDD B3_DNA 60 171 IPR003340 GO:0003677
Trme14761g00001 177 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14761g00001 Trme-Chr14761 323 856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14761g00001 64 163 RAV Transcription Factor Family AT3G61970 33.000 3.67e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14761g00001 - - pvu:PHAVU_009G204600g 270.011