Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme147397g00001 GTTATAAACTTTGAAATGCCTCGCAGTGTGGCCGGATACGTACACCGAATTGGACGTACTGGAAGAGCATATAATTCCGGTGCTTCTATCTCCTTGATGAGATGGATACCTTCGAAGAAGTACAATCTTTTGTTGGGGACAATGAAAACAATGGCTCAAACACAATTGCCGAGTTTCCCTTACTCACCAAGAATGCAGTTGAATCTTTACGGTATAGGGCTGAGGTGA 228 0.4342 VINFEMPRSVAGYVHRIGRTGRAYNSGASISLMRWIPSKKYNLLLGTMKTMAQTQLPSFPYSPRMQLNLYGIGLR 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme147397g00001 75 Pfam Helicase conserved C-terminal domain 1 24 IPR001650 -
Trme147397g00001 75 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 50 IPR027417 -
Trme147397g00001 75 Gene3D - 1 57 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme147397g00001 1 33 Eukaryotic Initiation Factors Gene Family AT1G72730 48.485 7.08e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme147397g00001 K14810 - nnu:104606270 65.4698