Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme147348g00001 ATGGATAGAGTTGGAAGTTTAACTGGAGGTGTAGAATTTCTTGAGCTATGTGGTTTTGAGAGAACTGATGACTTCTTGCATCTTCCTAGTGAAAAGGTTGACATGGAACTACTAAGTTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAATCCTTTCTTTGGACTTCTAA 172 0.3721 MDRVGSLTGGVEFLELCGFERTDDFLHLPSEKVDMELLSSAGFVLNSAMTNPFFGLL 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme147348g00001 57 Pfam PUB domain 2 34 IPR018997 -
Trme147348g00001 57 SUPERFAMILY PUG domain-like 2 53 IPR036339 -
Trme147348g00001 57 Gene3D - 1 51 - -
Trme147348g00001 57 PANTHER F13M7.16 PROTEIN 2 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme147348g00001 Trme-Chr147348 117 408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme147348g00001 2 57 C2H2 Transcription Factor Family AT1G04850 58.621 3.02e-19 76.3