Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme147220g00001 ATTTTAATGCAATACTACAATTCTTCGTTGGAAATAGATACGGTTTCGAAGAAAGTTCTTAAATTTGGGGCTGTTGCTGCAATCTGTGGTGGACTAAAAGCAAATTACAGTAACACTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGCGGATAGTCTTCCTCGCCAAGCAGACATTTTAAAACCCAATTTGTTAGCTCCTGGAAATTTGATATGGGCAGCATGGAGTTCTCTTGGCACTGACTCGGTTGAATTTCAAGGTTTGTAA 279 0.4086 ILMQYYNSSLEIDTVSKKVLKFGAVAAICGGLKANYSNTAPKVMYYSARGPDPADSLPRQADILKPNLLAPGNLIWAAWSSLGTDSVEFQGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme147220g00001 92 Gene3D Peptidase S8/S53 domain 37 84 IPR036852 GO:0004252|GO:0006508
Trme147220g00001 92 SUPERFAMILY Subtilisin-like 17 82 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme147220g00001 Trme-Chr147220 62 340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme147220g00001 1 91 Subtilisin-like Serine Gene Family AT4G20430 67.033 4.82e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme147220g00001 - - gmx:100796456 165.622