Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14720g00001 ATGGAGCATATTAATAATGAGGATATTCCATCAGCACCAGCAACACCAGGCACTCCTGGTGCACCTCTGTTTGGTGGGTTTAACTCAGAGAGAAATGGGAATGGTAGTAATAAGTACAAGAAGTCCCTCCTTAAAAATTGTAAATGTTTCGGTGTCAAAGAATGGACCTTAGAAGATGGAGCTCTACCCACCGTCACGTGTTCATTAATGCCACCCCCTCCTCCTGTTCCTCTCGCAAAAAAGATAGGAGCTGAGTTTATAGGGACATTTATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGACAAACGGGGCGGAAACTCTGATCGGATGTGCTACCTCGACTGGTCTTGCCGTTATGATCATCATCCTCTCCACCGGCCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACCATTTCCTTTGCTGCATTAAAGCACTTCCCGTGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCAATATGTGCTGCATATGCTCTCAAAGGGGTTTTTCACCCTTTCATGAGTGGCGGAGTCACTGTT 567 0.4638 MEHINNEDIPSAPATPGTPGAPLFGGFNSERNGNGSNKYKKSLLKNCKCFGVKEWTLEDGALPTVTCSLMPPPPPVPLAKKIGAEFIGTFILMFAGTATAIVNQKTNGAETLIGCATSTGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAYALKGVFHPFMSGGVTV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14720g00001 189 ProSitePatterns MIP family signature. 137 145 IPR022357 -
Trme14720g00001 189 SUPERFAMILY Aquaporin-like 78 182 IPR023271 -
Trme14720g00001 189 MobiDBLite consensus disorder prediction 1 27 - -
Trme14720g00001 189 Pfam Major intrinsic protein 78 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme14720g00001 189 PRINTS Major intrinsic protein family signature 156 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme14720g00001 189 PRINTS Major intrinsic protein family signature 119 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme14720g00001 189 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme14720g00001 189 PANTHER AQUAPORIN NIP2-1 44 184 IPR034294 -
Trme14720g00001 189 Gene3D Glycerol uptake facilitator protein. 75 188 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14720g00001 Trme-Chr14720 1 915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14720g00001 4 189 Major Intrinsic Protein MIP AT1G80760 73.822 3.22e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14720g00001 K09874 - gmx:100815637 296.204