Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146902g00001 ATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTCGCACCAACATAGCTTATGGAAAAGAAGGAATTACTGCCACAGAAGATGAAATAATTGCAGTAGCAAAAGCAGCAAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTACGAAACATTGGTTGGCGAAAGTGGCACACATTTATCAGGTGGACAAAAGCAACGTATAGCAATTGCAAGAGCCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNAACTCGTAGTTCAAGAGGCTTTAGATAGAGTGAGTGTTAGTAGAACTACTGTTGTTGTGGCTCACCGTCTTGAGACGACTAAAGGTGCTGATATTATAGCTGTAGTGAAAAATGGAGTGATTGCTGAAAATGGTACACATGATTTGCTGATGAAGATTGATGGTGGAGTTTATGCTTCATTGGTTGCTCTTCATATTAGTGCATCATAG 504 0.3472 MGLVGQEPILFNESIRTNIAYGKEGITATEDEIIAVAKAANAHNFISSLPNGYETLVGESGTHLSGGQKQRIAIARAXXXXXXXXXXXXXXXXXXXXXXLVVQEALDRVSVSRTTVVVAHRLETTKGADIIAVVKNGVIAENGTHDLLMKIDGGVYASLVALHISAS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146902g00001 167 PANTHER ABC TRANSPORTER B FAMILY 1 162 IPR039421 -
Trme146902g00001 167 Gene3D - 101 162 IPR027417 -
Trme146902g00001 167 Gene3D - 1 77 IPR027417 -
Trme146902g00001 167 Coils Coil 74 77 - -
Trme146902g00001 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 161 IPR027417 -
Trme146902g00001 167 Pfam ABC transporter 2 78 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146902g00001 Trme-Chr146902 10 513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146902g00001 1 166 Calmodulin-binding Proteins AT2G36910 46.707 2.04e-40 142