Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146894g00001 ATGTCACATTACCCTGTGACTTGCCAGCTAATTATTCAACTTGACATATATCAAGGATATGAGTTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCCGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAG 168 0.4405 MSHYPVTCQLIIQLDIYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFK 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146894g00001 56 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 56 IPR001344 GO:0009765|GO:0016020
Trme146894g00001 56 Gene3D Chlorophyll a/b binding protein domain 7 56 - -
Trme146894g00001 56 Pfam Chlorophyll A-B binding protein 14 47 IPR022796 -
Trme146894g00001 56 SUPERFAMILY Chlorophyll a-b binding protein 14 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146894g00001 Trme-Chr146894 114 514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146894g00001 17 56 Chloroplast and Mitochondria Gene Families AT4G10340 92.500 5.96e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146894g00001 K08916 - egt:105974277 91.6633