Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146740g00001 GTAATCATCTGTTCAACTTTGCTTGTTTTTGCCCTCGGTGCTATTGTTCGAATTCATCTTCATTTCAAGATGAAAGGCGAAGATCATACAAGAATCGAAAACTTTTTGAAAGATTACAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGTTAGGCGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCGAGCGAAATTGTGGTTGCTGTTAAGATGCTCAATAATGCAGAGGGAGATGGGAAAGAGTTCATAAATGAAGTGGGGACTATGGGAAAAATCCACCATCTTAATGTTGTCCGTTTGCTTGGCTATTGTGCCGATGGATTTCACCGTGCTTTAGTCTATGACTTTTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGCAACAAAGATAGT 447 0.3848 VIICSTLLVFALGAIVRIHLHFKMKGEDHTRIENFLKDYKALKPTRFSYADIKRITNKFKDKLGEGAHGAVYKGKLSSEIVVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGYCADGFHRALVYDFFPNGSLQKFISPPSNKDS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146740g00001 149 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Trme146740g00001 149 ProSiteProfiles Protein kinase domain profile. 57 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme146740g00001 149 Pfam Protein tyrosine and serine/threonine kinase 58 142 IPR001245 GO:0004672|GO:0006468
Trme146740g00001 149 SUPERFAMILY Protein kinase-like (PK-like) 38 142 IPR011009 -
Trme146740g00001 149 Gene3D Phosphorylase Kinase; domain 1 30 131 - -
Trme146740g00001 149 PANTHER OS07G0415500 PROTEIN 7 146 - -
Trme146740g00001 149 FunFam serine/threonine-protein kinase PBS1-like 25 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146740g00001 Trme-Chr146740 108 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146740g00001 29 141 Receptor kinase-like Gene Family AT1G66980 50.000 4.84e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme146740g00001 PK_Tyr_Ser-Thr 2.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146740g00001 - - mtr:25488766 266.929