Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14665g00001 GAGGAGGCAGTGAAGCGCGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTTCATGGTGGATCTTGTTCTGTAACAGCATTGATTAGGAATGGTAACTTAATTGTATCTAACGCCGGTGATTGCCGTGCTGTCATTAGTAAAGGAGGGGTTGCAAAGGCCCTAACATCTGATCACCGACCTTCGAGGGAAGACGAAAGAGACAGAATTGAAACCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTGGCTGTATCTAGAAGTATCGGAGATCGACACTTGAAACAATGGGTGACAGCTGAGCCTGAGACTAAAGTTATCAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAGGAAGCAGTAGACACTGCTCGTCAATTCTGCGTAGGAAACAACAAACAACAAGCATTGTTAGCCTGTAAAAAGCTTGCAGAGTTGGCTGTTTCACGCGGCTCTTTGGATGATACAAGTGTTATGCTGATCAAATTGAAACAATATATTTAA 567 0.4233 EEAVKRGYLNTDSEFMKKDLHGGSCSVTALIRNGNLIVSNAGDCRAVISKGGVAKALTSDHRPSREDERDRIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDTARQFCVGNNKQQALLACKKLAELAVSRGSLDDTSVMLIKLKQYI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14665g00001 188 SUPERFAMILY PP2C-like 2 185 IPR036457 -
Trme14665g00001 188 Gene3D - 1 187 IPR036457 -
Trme14665g00001 188 SMART PP2C_4 1 182 IPR001932 -
Trme14665g00001 188 ProSiteProfiles PPM-type phosphatase domain profile. 1 184 IPR001932 -
Trme14665g00001 188 PANTHER PROTEIN PHOSPHATASE 1 183 IPR015655 GO:0004722|GO:0006470
Trme14665g00001 188 Pfam Protein phosphatase 2C 2 176 IPR001932 -
Trme14665g00001 188 CDD PP2Cc 1 184 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14665g00001 Trme-Chr14665 1 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14665g00001 1 184 PP2C-type Phosphatase Gene Family AT1G07160 73.118 1.37e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14665g00001 K17506 - gmx:100795728 337.421