Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146603g00001 CTTCCGAGAGAGAGTCAGGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAATATCATTGCGTGCGAGGGCGAGGATAGAATAGAACGGTATGAAGTCGCCGGAAAATGGAGGGCAAGGTTGAAAATGGCCGGATTTACTTCATCACCAATGAGTACAAATGTGGAAGAAGCAATTAAGGAACTCATTAGGCAGTATTGTGACAAGTACAAGATNAAACAAGAAATGGGGGCACTTCATTTTGGATGGGAAGACAAAAACTTGATTGTTGCTTCGGCATGGAAGTGA 300 0.4367 LPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARLKMAGFTSSPMSTNVEEAIKELIRQYCDKYKXKQEMGALHFGWEDKNLIVASAWK 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146603g00001 99 Pfam GRAS domain family 1 99 IPR005202 -
Trme146603g00001 99 ProSiteProfiles GRAS family profile. 1 99 IPR005202 -
Trme146603g00001 99 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 94 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146603g00001 Trme-Chr146603 1 300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146603g00001 1 99 GRAS Transcription Factor Family AT1G21450 73.000 4.93e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme146603g00001 GRAS 4.9e-30 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146603g00001 - - gmx:100807048 180.259