Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146566g00001 ATGGCTACATATGAAGATCCATTGCTTGGTGATGTTCAAGTGTATCCCGAGAAAGGAACTGTTGCTTTCTCTGCTGGTTTGCATGGTTGGGCTTTTACTCTGACCAACTTTGCAAAGATGTATGCCTCCAAATTTGGTGTTGACGAGTCAAAGATGATGGAGAGGCTCTGGGGTGAAAATTTCTTCGATCCTGCCACTAAGAAATGGACCACCAAGAATACCGGTTCAGCTACTTGCAAAAGAGGGTTTGTTCAGTTCTGTTATGAGCCTATAAAGCAGGTTATTAACACTTGTATGAATGATCAGAAGGACAAGTTGTGGCCTATGCTGACAAAGCTAGGGTGCAGCCTGAAGTCAGAGGAGAAGGACTTGATGGGTAAGCCTTTGATGAAACGTGTCATGCAGACTTGGCTCCCAGCAAGCAGTGCACTTCTTGAAATGATGATCTTTCATCTTCC 458 0.4432 MATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQVINTCMNDQKDKLWPMLTKLGCSLKSEEKDLMGKPLMKRVMQTWLPASSALLEMMIFHLP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146566g00001 153 FunFam Elongation factor 2 34 138 - -
Trme146566g00001 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 153 IPR027417 -
Trme146566g00001 153 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 153 - -
Trme146566g00001 153 Gene3D Yeast translation eEF2 (G' domain) 34 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146566g00001 Trme-Chr146566 1 458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146566g00001 1 153 Eukaryotic Initiation Factors Gene Family AT1G56070 90.850 4.51e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146566g00001 K03234 - qsu:112038254 313.538