Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1463g00001 GCTTGTCCTGTTCGTAAAGAGAATGACTGTTCAAGTGAAAATGCTTGTCCTGTTGGCCCTAGTCCGATGGAAATCAATGATGAATGTCAGACCTCAAATATTACCAATGAAGACAAATTTCATATTGATGTCGAAAGAGCACAGTTGTGTCAGAACCCCGATGCTACCTCTATATCAGTGACTGATACTGATGTAACAAATGAGGAGGAAATATATGTGGCACCAAATATTGGCATGGAGTTTAAATCAGAAGAGCATGCTTACAAGTGTTATAACAATTATGCTGTTCTGAAAGGTTTCAGCATAAGAAAGGATTTCATCAACAAAAGTAGGGTAGATGGTTCAGTGGTGTCCAGAAGATTCACCTGCCATAGACAGGGTTTTCGACCTAATAAAGATTATAAAAATCCAAAGAATTTCCAGCAGGAAACAAGGACTGGTTGCTTGGCACATATGACTATTTCTCGTCAGCCAAATAGCAAGTTTCGTGTCACTAGTTTTGAAACAGAACACAATCATGAGTTTGTAACACCCTCTGATGCTCATATGTTGCCATCACAGAAGAAATTGAGTTTTGCTCAAGCTGTCGAAGTGAACATAACTGGGTCCACTTTGGATGGGGTACCGAAACTGGGAATGGGATTTGATTCAGAGGAGCATGCATATGAATTTTATAATACATATGCTGCACAAGTAGGCTTCAGTGTGAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGCGCTGTAGCATCAAGAAGGTATACTTGCTTCAGAGAAGGTTTTCGGCAGAAAGAGAAACGAGATAAGAATGTAAAGAGACCTCGGAAGGATACTAGAATTGGATGTTTAGCACAACTGATTATTTCTCGTCAGCCTGATGGCAGGTATCATGTAACTCATTTTGAAGAAAAACACAATCATGAGCTTGTTGCTGCATGTAGAGTTCATATGTTAAGATCACAGAAGAGATTAGCTGCAACTCGAGTTGAAGACAATATCGTAGCTGGATGTAGTGCGCCGCCGAAGCCAGCCTCTGCATCCAACTGCAGGACAGTTGAAGGTTTTCATGATTTAGATTACGATCCTGTGGATTGTGAATATCAACTACCTTTCAAATGTACCAGAGAAATAAAAGAGGACGAAATCGAAAAGATTAGGCACTACTTTCAAAGCAAGCAAGCAAAGAATCCTTCTTTCTTTTATGCTTTCCAGCTTGATGCCGAGAATCAAATAACTAATATATTTTGGGCTGATGAAAAGATGATAGTTGACTACAGTGATTTTGGTGACGTTGTTTGTTTTGATACGAGTTATAAATTTTATAAGGACTCACGCCCGTTTGCTCCATTTCTCGGTATAAATAATCACAGGCAAATGAATATCTTCGGGGCAGCACTTCTATACGATGAATCTGTGGAATCTTTTAAGTGGCTGTTTCATGTTTTCATTGAGGCTATGTCTGGAACCAAGCCAAAGACAATCCTAAGAGACCAAGATGCAATAATAGCTGAAGCTATTAATTCCATATCACCTCAAACAAAACAACGAGTTTGTGTTTGGCATGTCTACCAAGATGCCCTCAAGCAACTGAGTCATATGTCTGTTGAATCTGATTCTTTTGTAAATGATTTGAGCTGCTGCTTTTTTAATCACGAGGAAGAAGAGGATTTTGTTAATGCATGGAATGCTCTCATGAACATGTATAATCTGTGGGAAAATGAATGGTTGCGTCAAATATATGAAAGCAGAGACCAATGGGCCATAGCTTACAGAAGACACATTTTTTGTGCTGATATCGCAAGCTTGCTCATGCGAGAAAATCTTATTGGCAACTTGAAAAAGCACCTAAAGAATGACTCAAGTGTTCTTCCATTTCTCAAGCATCTTGGGAAGATGGTGACCGATTGGCACTACAAGGAATTAGAAGCTAATTATGACACGAGCCGGCATATGCCAGCCCTAATGGGTGATATCGTCACATTAAAGCATGCAAGAGATCCATACACACCAAAGATATTTGAGTTATTCCAAAAAGAATATGAAGCATGTTTAAATCTAGTGCTAAAGCCTTACAGTGAGAGTGGCTCGTTGTATAATTATAAAGTTAGTGTATATGAACAAGTCCGTGAGTATATGGTTACTTTCGATTCGTCTAATGAGACTGTTAGTTGCAGCTGTATGAAGTTTGAGTGTGTGGGAGTCTTGTGCTGCCATGCATTAAAAGTTCTTGATTATAGGAACATAAGGATAGTTCCATCCAAGTACATCTTAAAGAGATGGACCAAAGATGCTAGAGTTTGA 2304 0.3893 ACPVRKENDCSSENACPVGPSPMEINDECQTSNITNEDKFHIDVERAQLCQNPDATSISVTDTDVTNEEEIYVAPNIGMEFKSEEHAYKCYNNYAVLKGFSIRKDFINKSRVDGSVVSRRFTCHRQGFRPNKDYKNPKNFQQETRTGCLAHMTISRQPNSKFRVTSFETEHNHEFVTPSDAHMLPSQKKLSFAQAVEVNITGSTLDGVPKLGMGFDSEEHAYEFYNTYAAQVGFSVRKDYVNRSKVDGAVASRRYTCFREGFRQKEKRDKNVKRPRKDTRIGCLAQLIISRQPDGRYHVTHFEEKHNHELVAACRVHMLRSQKRLAATRVEDNIVAGCSAPPKPASASNCRTVEGFHDLDYDPVDCEYQLPFKCTREIKEDEIEKIRHYFQSKQAKNPSFFYAFQLDAENQITNIFWADEKMIVDYSDFGDVVCFDTSYKFYKDSRPFAPFLGINNHRQMNIFGAALLYDESVESFKWLFHVFIEAMSGTKPKTILRDQDAIIAEAINSISPQTKQRVCVWHVYQDALKQLSHMSVESDSFVNDLSCCFFNHEEEEDFVNAWNALMNMYNLWENEWLRQIYESRDQWAIAYRRHIFCADIASLLMRENLIGNLKKHLKNDSSVLPFLKHLGKMVTDWHYKELEANYDTSRHMPALMGDIVTLKHARDPYTPKIFELFQKEYEACLNLVLKPYSESGSLYNYKVSVYEQVREYMVTFDSSNETVSCSCMKFECVGVLCCHALKVLDYRNIRIVPSKYILKRWTKDARV 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1463g00001 767 ProSiteProfiles Zinc finger SWIM-type profile. 712 748 IPR007527 GO:0008270
Trme1463g00001 767 Pfam FAR1 DNA-binding domain 91 176 IPR004330 -
Trme1463g00001 767 Pfam FAR1 DNA-binding domain 223 311 IPR004330 -
Trme1463g00001 767 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 194 IPR031052 GO:0006355
Trme1463g00001 767 Pfam MULE transposase domain 432 525 IPR018289 -
Trme1463g00001 767 SMART 26again6 723 750 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1463g00001 Trme-Chr1463 3 2306 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme1463g00001 MULE 1.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1463g00001 K17604 - tpra:123911704 1526.53