Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146379g00001 AAGTTGAACAAAGCTATATGGAGCCAGGGAATCAGAAGTGTCCCAAGGAGGGTTAGAGTACGCATTGCCCGCAAGAGAAACGATGATGAGGATGCTAAGGAAGAGCTCTACTCTCTTGTTACGGTAGTTGAAATCCCCAAGGAAGAGCTCAAAGGGTTGGAGTACAATATTATGGTTATCAATTGA 186 0.4409 KLNKAIWSQGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLEYNIMVIN 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146379g00001 61 Gene3D - 1 59 IPR023621 -
Trme146379g00001 61 PANTHER 60S RIBOSOMAL PROTEIN L31 1 57 IPR000054 GO:0003735|GO:0005840|GO:0006412
Trme146379g00001 61 Pfam Ribosomal protein L31e 1 34 IPR000054 GO:0003735|GO:0005840|GO:0006412
Trme146379g00001 61 SUPERFAMILY Ribosomal protein L31e 1 34 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146379g00001 Trme-Chr146379 1 522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146379g00001 1 58 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 72.414 1.52e-25 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146379g00001 K02910 - gmx:100306335 93.9745