Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme146246g00001 AGAGTTACAGCTTCCAATGAACCATTACATACTCTTTCAAGGTCGAAAAAATCACATTGGGACTCGCCGCGACTCTCTTATGATGCATTGAAATCCACCACAAAGAATAAGGAACTTCCTAGATTTTCCTTGGACAGCAAGCAAGGATCCATTAGAGGGATCGAAGGAGGAAACAAGGCTCGCAATCTGTTGAATGGTTCACAAAGGGGGTATGAGAGAAACTCGAGCGCAATGCTTAATAAATTGCAAGAACCAGAAACATCAAAAAGGTCAACGAGTGTTGTAGCTAAGTTGATGGGACTAGAAGTTCTCCCAGACTCAACACAAACTGGTCAGATTTCTATCTGCTCCGTCGATAAAAAGGAGCTCGTGGAAAGAACTAGCACAAGTGGTGAATCCAAGAAACACCAAAGTTCGGCGTCCCCAAGGAATAGAAGGGGTGATGATTCAATCACAAATGTGAAACCTTGTTCGCAATTTGAACTAGCACTGACTACTCCTTGGAGGCAACCTGATGCAGGCCAAAGTTCTTTGTTACAAGATTCTTCAAAGGG 554 0.4332 RVTASNEPLHTLSRSKKSHWDSPRLSYDALKSTTKNKELPRFSLDSKQGSIRGIEGGNKARNLLNGSQRGYERNSSAMLNKLQEPETSKRSTSVVAKLMGLEVLPDSTQTGQISICSVDKKELVERTSTSGESKKHQSSASPRNRRGDDSITNVKPCSQFELALTTPWRQPDAGQSSLLQDSSKG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme146246g00001 185 PANTHER LONGIFOLIA PROTEIN 6 183 IPR033334 GO:0051513
Trme146246g00001 185 MobiDBLite consensus disorder prediction 61 93 - -
Trme146246g00001 185 MobiDBLite consensus disorder prediction 144 185 - -
Trme146246g00001 185 MobiDBLite consensus disorder prediction 47 93 - -
Trme146246g00001 185 MobiDBLite consensus disorder prediction 123 185 - -
Trme146246g00001 185 MobiDBLite consensus disorder prediction 1 23 - -
Trme146246g00001 185 MobiDBLite consensus disorder prediction 123 143 - -
Trme146246g00001 185 Pfam DUF761-associated sequence motif 93 108 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme146246g00001 Trme-Chr146246 2 555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme146246g00001 21 178 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.723 2.25e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme146246g00001 - - mtr:25497547 283.108