Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145996g00001 GCAACACCGAAAGGTGTTCTGAGAGTGATGGGCGTACCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCGAAGTACTTGCCTGAATCACCAGCTGATGGTAAAGGTGCCCTGTTTTTTCTTTCCCTTCGTAGTTCCTACAAATTTATCAGAAATGTCACGCTGTTTTGA 189 0.4392 ATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKGALFFLSLRSSYKFIRNVTLF 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145996g00001 62 Gene3D - 1 33 - -
Trme145996g00001 62 SUPERFAMILY Homeodomain-like 1 30 IPR009057 -
Trme145996g00001 62 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 39 IPR044848 GO:0003700
Trme145996g00001 62 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1 30 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme145996g00001 Trme-Chr145996 179 464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme145996g00001 1 40 G2-like Transcription Factor Family AT4G28610 72.500 3.19e-15 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme145996g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145996g00001 - - zju:107423514 90.1225