Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145964g00001 ATGATGTGGTTTTTCAAAGATAGAGGCTTTGATGATAACATCATACAAGGAATGTTCAAAAAGTGCAAGCGTCTCGAGACGGCGCATCGCGAAAGAGCAGATGAGAATTGGGAGTATTTGAAAACCATTGGCATTCTAGAAAGGAAACTTCCTTCAATTGTTTCAAAATGTCCTAAGATTCTTGTACTTGGTCTTAATGAGAAAATTCTCCCCATGGTTGAGTGTCTCAACACACTTGCAACAAAACCTAATGAAGTTGCATCTGCCATAGCCAAGTTCCCTCACATTCTCTCTTATAGTGTCGAAGAGAAGCTTTGTCCCCTTTTGGCGTTCTTTCAAGCATTAGGCGTCCCCGAAAAACAAATTGGGAAAATTTTACTGCTAAACCCTAGGCTTATTAGTTACAGCATTGAGATAAAGATGGGGGAAATTGTGAAATTCCTTGCTAGCATTGGTCTTGATAAAGACGGAATGATTGGAAAAATTATG 489 0.3926 MMWFFKDRGFDDNIIQGMFKKCKRLETAHRERADENWEYLKTIGILERKLPSIVSKCPKILVLGLNEKILPMVECLNTLATKPNEVASAIAKFPHILSYSVEEKLCPLLAFFQALGVPEKQIGKILLLNPRLISYSIEIKMGEIVKFLASIGLDKDGMIGKIM 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145964g00001 163 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Trme145964g00001 163 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Trme145964g00001 163 SMART mt_12 51 82 IPR003690 GO:0003690|GO:0006355
Trme145964g00001 163 Gene3D Transcription termination factor 3, mitochondrial 79 162 IPR038538 -
Trme145964g00001 163 Pfam mTERF 4 112 IPR003690 GO:0003690|GO:0006355
Trme145964g00001 163 PANTHER CGI-12 PROTEIN-RELATED 25 156 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme145964g00001 mTERF 4.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145964g00001 K15031 - qsu:112002844 267.7