Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145860g00001 AATGTGAAAAGCTGTGTATATAATATCTTTGATGAAGTATCTGATTCAAAATATCCTGGTTTTAAAAAGGCTATCTGGTTAGAATGCACGCAAGAAGCAGGGGAAATCATATTTGTTCCTAGCGGATGGTATCATCAAGTTCATAATTTGGTATGTTCTGGTTCTGATATTGATTGTGCTCCTTTATAG 189 0.3439 NVKSCVYNIFDEVSDSKYPGFKKAIWLECTQEAGEIIFVPSGWYHQVHNLVCSGSDIDCAPL 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145860g00001 62 Gene3D Cupin 2 59 - -
Trme145860g00001 62 ProSiteProfiles JmjC domain profile. 1 62 IPR003347 -
Trme145860g00001 62 SUPERFAMILY Clavaminate synthase-like 10 50 - -
Trme145860g00001 62 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 16 51 - -
Trme145860g00001 62 Pfam Cupin-like domain 11 50 IPR041667 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trme145860g00001 Cupin_8 1.3e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145860g00001 - - adu:107463569 108.997