Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145803g00001 ATGGAAAACTACAACAATGATTCTTCTGAGTGGCAGCAACAACAGCAGCAACATAAGCATTGGTCTCAATATAGTAGTGATGATCATTCACACTTTCCAACACAAATTCTTCCTCATAATGTTTCTGATTCTTCTTCTGCTTCTTTTCAATATAGTGAATTTCAATCATGGCCTTTACCTATTGAAGAAAGTTTAGAAGATAGAGCAGTAAGTGCTTCTAAGAGTCATAGTCAAGCTGAGAAAAGACGCAGAGATAGGATTAATACTCAGCTTGCTAATCTTAGAAAACTTATTCCTAAGTCTGATAAGGGAAGGGAAGTTAAGTGA 327 0.3578 MENYNNDSSEWQQQQQQHKHWSQYSSDDHSHFPTQILPHNVSDSSSASFQYSEFQSWPLPIEESLEDRAVSASKSHSQAEKRRRDRINTQLANLRKLIPKSDKGREVK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145803g00001 108 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 108 IPR011598 GO:0046983
Trme145803g00001 108 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 102 IPR036638 GO:0046983
Trme145803g00001 108 MobiDBLite consensus disorder prediction 67 108 - -
Trme145803g00001 108 Gene3D - 62 108 IPR036638 GO:0046983
Trme145803g00001 108 PANTHER TRANSCRIPTION FACTOR BHLH30 5 103 IPR045847 GO:0003700|GO:0006355
Trme145803g00001 108 MobiDBLite consensus disorder prediction 1 45 - -
Trme145803g00001 108 MobiDBLite consensus disorder prediction 67 90 - -
Trme145803g00001 108 Pfam Helix-loop-helix DNA-binding domain 74 101 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme145803g00001 67 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 64.865 4.41e-09 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trme145803g00001 HLH 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145803g00001 - - gmx:100799687 116.701