Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14557g00001 GGAGAACTATTCCTACTTCTTGACCAACAACCAACAAAGGTTCTCAAGGAAGATGCTGTCAGATTTTATGCTGCTGAGGTACTAATTGCATTGGAGTACCTTCATTGTCAAGGCATAATTTATCGTGATTTGAAGCCAGAAAACGTGTTGATCCAAAGCAACGGGCATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGGAAATTATAACTGGTTCAGGTCATACTAGTGCTGTAGATTGGTGGGCTCTAGGTAACTCTTAA 282 0.4007 GELFLLLDQQPTKVLKEDAVRFYAAEVLIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQEIITGSGHTSAVDWWALGNS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14557g00001 93 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14557g00001 93 Gene3D Transferase(Phosphotransferase) domain 1 2 91 - -
Trme14557g00001 93 FunFam Serine/threonine-protein kinase OXI1 2 71 - -
Trme14557g00001 93 SUPERFAMILY Protein kinase-like (PK-like) 1 91 IPR011009 -
Trme14557g00001 93 Pfam Protein kinase domain 3 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14557g00001 93 PANTHER FLIPPASE KINASE 1-RELATED 74 91 - -
Trme14557g00001 93 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14557g00001 Trme-Chr14557 3 1156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14557g00001 1 91 AGC Kinase Gene Family AT3G45780 58.955 6.02e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme14557g00001 Pkinase 4.4e-21 CL0016