Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145438g00001 ATGGAAATTTATGTTGATGACGAAGCAAAATTGACCCTTCATGGTCTTGTTCAGCACTACATCAAATTGAAGGAGGAGGAGAAGAACCGAAAGTTGAATGATCTTCTTGATGCACTGGACTTCAATCAAGTTGTGATCTTTGTGAAAAGTGTCAGCAGAGCAGCTGAGCTGGACAAACTACTTGTGGAATGCAACTTTCCATCCATATGCATTCATTCTGGAATGTCCCAGGAAGAAAG 239 0.41 MEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145438g00001 79 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 79 - -
Trme145438g00001 79 Gene3D - 12 79 IPR027417 -
Trme145438g00001 79 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 79 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme145438g00001 Trme-Chr145438 51 384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme145438g00001 1 79 Eukaryotic Initiation Factors Gene Family AT5G11170 96.203 3.60e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145438g00001 K12812 - gmx:100808957 152.525