Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145410g00001 ATGAATTTGAGCATTTTTGGAGTATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGGAGGTTGGAAACACAAAATTTGGCTACAATGAGAGCAACACATCAAGCAATTACTATTACATGCCTAATTTTGAAAAATTTGGCATTGCACAAAGTGGTGAGAAGTTGAGTGAAGCTTTGTCAAACACTAGATTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGTTACAAGCAYCAATATTTGAGATAATTAATGTGATTGGGGATATATACTCCATTCCAAAGGGATGGGAAATTCCAACTATTGGGAAGAAGTTGAGGATAG 340 0.3588 MNLSIFGVWAYDATIALAMAIEEVGNTKFGYNESNTSSNYYYMPNFEKFGIAQSGEKLSEALSNTRFNGLSGDFNVVDGKLQAXIFEIINVIGDIYSIPKGWEIPTIGKKLRI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145410g00001 113 Gene3D - 1 81 - -
Trme145410g00001 113 PANTHER OS06G0188250 PROTEIN 2 87 - -
Trme145410g00001 113 SUPERFAMILY Periplasmic binding protein-like I 2 94 IPR028082 -
Trme145410g00001 113 Pfam Receptor family ligand binding region 7 93 IPR001828 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme145410g00001 2 113 Ion Channels AT5G27100 34.839 9.31e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145410g00001 K05387 - lja:Lj0g3v0303259.1 124.405