Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme145212g00001 GGTGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCCATATGGGCTGTCCAAGTTATCTTAATGGGCGCTGTTGAGGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTAGTCGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTAGGCCTTGCTGATGATCCAGAAGCTTTTGCAGAGTTGAAGGTAAAGGAGTTAAAGAATGGTAGATTAGCTATGTTCTCAATGTTTGGATTCTTTGTTCAGGCTATTGTAACCGGAAAAGGTCCTATAGAGAACCTTGCTGACCACCTTGCTGACCCAGTTAACAACAACGCATGGGCTTATGCCACAAACTTTGCCCCAGGAAAGTGA 378 0.4788 GGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme145212g00001 125 FunFam Chlorophyll a-b binding protein 3A, chloroplastic 8 118 - -
Trme145212g00001 125 SUPERFAMILY Chlorophyll a-b binding protein 3 122 - -
Trme145212g00001 125 Gene3D Chlorophyll a/b binding protein domain 1 118 - -
Trme145212g00001 125 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 125 IPR001344 GO:0009765|GO:0016020
Trme145212g00001 125 Pfam Chlorophyll A-B binding protein 15 91 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme145212g00001 Trme-Chr145212 1 378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme145212g00001 1 125 Chloroplast and Mitochondria Gene Families AT1G29930 92.857 8.35e-80 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme145212g00001 K08912 - osa:4324599 253.447