Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14503g00001 ATGGCTTCTAATTCAGACCAATGGGTGAAGGAATATAATGAAGCAATGAAACTTGCTGATGATATCAGCAGCATGATTTCTGAGTGGAGTTCAAATCCTGCATCTGGACCGGAAACCCAGCGGCAATCATCTGCTATAAGAAGGAAGATTACAATATTAGGGACTAGGCTTGATAGCTTGCAATCCCTTTTATCAAAGCTTCCTGCAAAGCCGCCTCTATCTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTACAAATTTGAGATCAAAAGTTAACGAAATGGCTTCTAAGCTGAACATGTCAAATTTTGCAAACAAGGATAGCTTGCTTGGTCCAGAAGTAAAACCAGATGTAATGAGTAGAACTGTTGGCCTGGACAACAATGGACTTGTTGGATTTCAACGACAAATTATGAAAGAACAAGATGAGAGCCTTGAGAGTTTGGAGAAGACTGTAATCAGCACGAAACACATTGCATTGGCAGTAAATGAAGAGTTGGATCTACACACAAGACTCATTGATGATTTAGACCAACATGTAGACGTCACAGACTCTCGGCTTAGG 567 0.4109 MASNSDQWVKEYNEAMKLADDISSMISEWSSNPASGPETQRQSSAIRRKITILGTRLDSLQSLLSKLPAKPPLSEKEMNRRKDMLTNLRSKVNEMASKLNMSNFANKDSLLGPEVKPDVMSRTVGLDNNGLVGFQRQIMKEQDESLESLEKTVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14503g00001 189 PANTHER SYNTAXIN 31 187 IPR045242 -
Trme14503g00001 189 Gene3D - 138 189 - -
Trme14503g00001 189 SUPERFAMILY t-snare proteins 13 100 IPR010989 GO:0016020|GO:0016192
Trme14503g00001 189 CDD SNARE_Qc 139 189 - -
Trme14503g00001 189 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 189 IPR000727 -
Trme14503g00001 189 FunFam syntaxin-51 isoform X2 138 189 - -
Trme14503g00001 189 SUPERFAMILY SNARE fusion complex 127 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14503g00001 1 189 SNARE and Associated Proteins AT1G16240 70.526 7.18e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14503g00001 K08503 - gmx:100782666 306.605