Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144715g00001 ATTGGAATAGACCTTGGAACAACGTATTCATGTGTTGCTGTGTGGCTAGATGAACACAACAGAGTTGAGATTATTCACAATGATCAAGGCAATAAAACAACACCTTCTTTTGTTGCTTTCACCGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAACTGCATCCAACCCCCAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATTCTGTTGTTCAAAATGATATGATGGTGTGGCCATTCAAGGTTGTTTCCGGAGTTGATGACAAACCGATGATATCTGTTAAGTACAAGGGACAAGAGAAACACCTATGTGCCGAAGAAATTTCATCTATGATTCTAACAAGGATGCGCGAGATTGCAGAGACTTTTTTGGAATCACCTGTCAAGAATGCAGTT 420 0.3952 IGIDLGTTYSCVAVWLDEHNRVEIIHNDQGNKTTPSFVAFTDDQRLIGDAAKNQTASNPQNTVFDAKRLIGRKFSDSVVQNDMMVWPFKVVSGVDDKPMISVKYKGQEKHLCAEEISSMILTRMREIAETFLESPVKNAV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144715g00001 140 Pfam Hsp70 protein 1 140 IPR013126 GO:0005524|GO:0140662
Trme144715g00001 140 PRINTS 70kDa heat shock protein signature 51 59 - -
Trme144715g00001 140 PRINTS 70kDa heat shock protein signature 29 41 - -
Trme144715g00001 140 SUPERFAMILY Actin-like ATPase domain 1 140 IPR043129 -
Trme144715g00001 140 Gene3D - 64 115 - -
Trme144715g00001 140 ProSitePatterns Heat shock hsp70 proteins family signature 1. 3 10 IPR018181 -
Trme144715g00001 140 FunFam Heat shock 70 kDa protein 64 119 - -
Trme144715g00001 140 Gene3D - 1 140 - -
Trme144715g00001 140 PANTHER HEAT SHOCK PROTEIN 70KDA 1 140 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144715g00001 Trme-Chr144715 1 557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144715g00001 1 140 Calmodulin-binding Proteins AT5G02500 72.857 3.94e-70 218