Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144622g00001 AGTCCAAAGATTAATCTTCATTTGCATAGAYATCATCTTCAACATAAGCATGAGTTCAAAGGTGTTCCAAAAGGGTTTATGGCAATAMAAGTTGGTTTAGGAGAAGAACAACAAAGGTTTGTTGTTCCTGTTTTGTACTTCAATCATCCTCTTTTCATTCAACTATTGAAAGAGGCAGAAGAAGAATATGGATTTGATCAAAAAGGAACAATTACTATTCCTTGTCATGTTGAAGAATTCACAAAAGTTAGTGGTTTGATTGAGAAAGACAAGAATCTTCATCAACATGTTGGATGTTTTGGTTTATGA 309 0.3269 SPKINLHLHRXHLQHKHEFKGVPKGFMAIXVGLGEEQQRFVVPVLYFNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFTKVSGLIEKDKNLHQHVGCFGL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144622g00001 102 Pfam Auxin responsive protein 18 83 IPR003676 GO:0009733
Trme144622g00001 102 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144622g00001 Trme-Chr144622 231 539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144622g00001 22 94 Calmodulin-binding Proteins AT5G20810 50.000 1.24e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme144622g00001 K14488 - gmx:111188139 150.984