Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14456g00001 TCGTTTTTGGGTAATCTCTTATGTGGGAAACCCCTTAACCCTTGTCCTAAAGAAGGAGGTACAAATAGTGGAACGGGGGGTGCAAATAGTGGTAAGGGAAATTCAAGTGTGGTTGATGGAAATCATGGGTTTGTGAAGAACAAGAAGAAAGGAAAATTATCTGGTGGTGCTATAGCTGGAATTGTTATTGGGTCTGTTGTGATTCTTTTGTTTGTAGTTTTTGCTTTGATTCTCTTATGCAGGAATAGGAATGGTGAAAAAACTAGTTCAATTGATGATGTTGCAGCAACTTTGAAGCATAATCAGAATGATGAGGAGATTCATGGTGAGAATATTGGAAATGGGTATTCGTCGGCCGCGGCGGCTATGGCTGCGCCGGCGGCGGTGAATGGTGAGAGAAGTGGTGAAAGTGTTGTTATTGGTGGTGGTGAGAAAAAATTGGTCTTTTTTAGGAATTGGGGTAAGGTGTTTGATTTGGAGGATTTGTTAAGAGCTTCTGCTGAGGTATTAGGGAAAGGGACTTTTGGGACATCTTATAAGGCAGTTTTGGAGGTTGGTCCTGTGGTTGTGGCTGTGAAGAGGTTAAGGGATGTGACTATTTCTGAGAGGGAATTTAAGGAGAAGATTGAGAGGGTTGGTGCAATGGTTCATGAAAATTTAGCACCTCTTAGGGCTTACTATTATAGTAGAGATGAGAAGCTTCTTGTTCATGATTATTTGCATATGGGAAGCTTATCTGCACTTTTGCATG 751 0.4154 SFLGNLLCGKPLNPCPKEGGTNSGTGGANSGKGNSSVVDGNHGFVKNKKKGKLSGGAIAGIVIGSVVILLFVVFALILLCRNRNGEKTSSIDDVAATLKHNQNDEEIHGENIGNGYSSAAAAMAAPAAVNGERSGESVVIGGGEKKLVFFRNWGKVFDLEDLLRASAEVLGKGTFGTSYKAVLEVGPVVVAVKRLRDVTISEREFKEKIERVGAMVHENLAPLRAYYYSRDEKLLVHDYLHMGSLSALLH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14456g00001 250 Gene3D Phosphorylase Kinase; domain 1 142 239 - -
Trme14456g00001 250 PANTHER OS05G0588300 PROTEIN 1 250 - -
Trme14456g00001 250 SUPERFAMILY Protein kinase-like (PK-like) 168 250 IPR011009 -
Trme14456g00001 250 ProSiteProfiles Protein kinase domain profile. 164 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14456g00001 250 MobiDBLite consensus disorder prediction 18 41 - -
Trme14456g00001 250 FunFam pollen receptor-like kinase 1 133 239 - -
Trme14456g00001 250 Pfam Protein tyrosine and serine/threonine kinase 168 250 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14456g00001 Trme-Chr14456 774 1524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14456g00001 1 250 Receptor kinase-like Gene Family AT1G48480 56.471 2.26e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme14456g00001 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14456g00001 - - gmx:100781597 246.514