Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14449g00001 ATGCTCTTCATTGCAATTGTATCTATATTAATGTTCTGTTTATGCACCTTGCTGAAGAAGGAAAAAACACCCCCCATAGAAACTGAAAAGCCAAGGACAGAAAGTGCTGTTTCAGCTGGGGGTTCTATTCCCCACCCAACCAGTACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAACTTTGAACCTGCAAGTGTACTTGGAGAAGGCGGGTTTGGCAAAGTTTTTAAAGGTATCTTAAGTGATGGTACTTCTGTTGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGCCGAGGTGGAAATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAATTAGTGGGATACTATAGTAACCGCGAGTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAACGGAAGTTTGGAGGCTTGGCTTCATG 457 0.4201 MLFIAIVSILMFCLCTLLKKEKTPPIETEKPRTESAVSAGGSIPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGKVFKGILSDGTSVAIKRLTSGGQQGDKEFLAEVEMLSRLHHRNLVKLVGYYSNRESSQNLLCYELVPNGSLEAWLH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14449g00001 152 Gene3D Phosphorylase Kinase; domain 1 28 141 - -
Trme14449g00001 152 FunFam Receptor-like serine/threonine-protein kinase ALE2 44 141 - -
Trme14449g00001 152 Pfam Protein tyrosine and serine/threonine kinase 68 152 IPR001245 GO:0004672|GO:0006468
Trme14449g00001 152 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 152 - -
Trme14449g00001 152 ProSiteProfiles Protein kinase domain profile. 64 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14449g00001 152 SUPERFAMILY Protein kinase-like (PK-like) 41 152 IPR011009 -
Trme14449g00001 152 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14449g00001 Trme-Chr14449 139 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14449g00001 1 152 Receptor kinase-like Gene Family AT4G02010 70.130 7.51e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trme14449g00001 PK_Tyr_Ser-Thr 8.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14449g00001 - - gmx:100793528 273.478