Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144437g00001 ATGGCGGCCGCTCCCACTCCTCGGGAAGAGAACGTTTACATGGCTAAGCTAGCCGAACAAGCCGAACGCTACGAAGAAATGGTGGAATTCATGGAGAAAGTTTCCGCCAACGCCGATAACGAAGAACTCACGGTGGAGGAAAGGAACCTTCTCTCGGTGGCTTATAAGAATGTCATCGGAGCTCGCCGTGCCTCGTGGCGTATCATTTCATCGATCGAGCAGAAAGAAGAGAGCCGCGGCAACGAGGATCACGTCACCGTCATCCGTGACTACCGATCTAAGATCGAATCTGAGCTCTCTAACATCTGTGACGGTATCCTCAAGCTTCTTGATTCTCGTCTCATTCCTTC 350 0.5171 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSANADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTVIRDYRSKIESELSNICDGILKLLDSRLIPS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144437g00001 117 Coils Coil 14 41 - -
Trme144437g00001 117 Pfam 14-3-3 protein 14 116 IPR023410 -
Trme144437g00001 117 SMART 1433_4 8 117 IPR023410 -
Trme144437g00001 117 PANTHER 14-3-3 PROTEIN 8 117 IPR000308 -
Trme144437g00001 117 Gene3D - 1 117 IPR036815 -
Trme144437g00001 117 SUPERFAMILY 14-3-3 protein 8 116 IPR036815 -
Trme144437g00001 117 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Trme144437g00001 117 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Trme144437g00001 117 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144437g00001 Trme-Chr144437 1 350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144437g00001 6 117 14-3-3 family AT1G78300 88.393 2.22e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme144437g00001 K06630 - gmx:100529128 221.861