Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144319g00001 ATGCAAACCGATGATGACCAACTTGCAACCGAGTCCCACAATAACTGTGACAGATATTTGAAACCGTGGATTATTCCGGATCCAGAAGTTCAATTCATTCCTCGTGCAAAAGAGGACGAATGTCTCATTCTGGCTAGTGATGGTTTGTGGGATGTGATGACAAATGAAGAGGTGTGTGACCTGGCTCGAAAACGCATACTTCTTTGGTACAAGAAAAACGGCTTAGAACTACCTTCAGAAAGGGGAGAGGGAAGTGATCCTGCTGCACAAGCAGCAGCAGAGTTTCTGTCGAATCGCGCTCTTCAGAAAGGAAGCAAAGACAACATCACCGTGATTGTTGTGGATCTAAAACCTCAACGCAAGTACAAGAACAAGACATGA 381 0.4488 MQTDDDQLATESHNNCDRYLKPWIIPDPEVQFIPRAKEDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGLELPSERGEGSDPAAQAAAEFLSNRALQKGSKDNITVIVVDLKPQRKYKNKT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144319g00001 126 CDD PP2Cc 17 116 IPR001932 -
Trme144319g00001 126 PANTHER PROTEIN PHOSPHATASE 17 116 IPR015655 GO:0004722|GO:0006470
Trme144319g00001 126 SUPERFAMILY PP2C-like 18 118 IPR036457 -
Trme144319g00001 126 Gene3D - 15 126 IPR036457 -
Trme144319g00001 126 ProSiteProfiles PPM-type phosphatase domain profile. 1 116 IPR001932 -
Trme144319g00001 126 Pfam Protein phosphatase 2C 17 109 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144319g00001 Trme-Chr144319 91 526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144319g00001 17 126 PP2C-type Phosphatase Gene Family AT1G17550 67.273 4.35e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme144319g00001 K14497 - gmx:102662702 206.838