Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144214g00001 ATAATTAAGAACGTTGATCTTGAAGAACTTATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCAATCAAGAGAATTAAAAAGAGCTGCTTTGGAGGGAGATCTTCTGAACAAGAACGGTTGGTGAGTCTTCAGTGCAATTTTCTTCTCAATACCATGTTATTTTGA 198 0.3788 IIKNVDLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFGGRSSEQERLVSLQCNFLLNTMLF 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144214g00001 65 ProSitePatterns Protein kinases ATP-binding region signature. 13 38 IPR017441 GO:0005524
Trme144214g00001 65 SUPERFAMILY Protein kinase-like (PK-like) 7 60 IPR011009 -
Trme144214g00001 65 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144214g00001 Trme-Chr144214 198 395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144214g00001 1 51 MAP Kinase Kinase Kinase AT1G79570 90.196 6.32e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme144214g00001 - - sspl:121788901 102.064