Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14420g00001 ATGCGAGCTTATAATGAAAAAAAATCTTTTAGGGTTATAGTCGTCATACCGCTCCTGCCTGGCTTCCAGGGGGGGATTGATGATGGGGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCCGCATTCTATCTTACATAATCTTCATGAGCTTCTTGGTTCAAGAGTACATGACTACATCTCTTTTTATGGTCTAAGGAATTATGGTAGACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTATACGTTCATAGTAAAATCATGATTATTGATGATTGTATTAGTTTGATTGGATCTGCTAATATTAATGATAGAAGCTTACTCGGCTCCAGGGACTCTGAGGTACAGTTCCAAGCCTCTTTCCTTTCATATGCTGTAAAAGTTTGA 414 0.4179 MRAYNEKKSFRVIVVIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGPHSILHNLHELLGSRVHDYISFYGLRNYGRLSDGGPVATSQVYVHSKIMIIDDCISLIGSANINDRSLLGSRDSEVQFQASFLSYAVKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14420g00001 137 SMART pld_4 88 115 IPR001736 GO:0003824
Trme14420g00001 137 Pfam Phospholipase D Active site motif 92 115 IPR001736 GO:0003824
Trme14420g00001 137 SUPERFAMILY Phospholipase D/nuclease 2 125 - -
Trme14420g00001 137 CDD PLDc_vPLD1_2_yPLD_like_2 1 124 - -
Trme14420g00001 137 Gene3D Endonuclease Chain A 1 133 - -
Trme14420g00001 137 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 88 115 IPR001736 GO:0003824
Trme14420g00001 137 PANTHER PHOSPHOLIPASE D 2 128 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14420g00001 Trme-Chr14420 509 1077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14420g00001 1 124 Phospholipase D Gene Family (Wang group) AT3G16785 79.839 7.38e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14420g00001 K01115 - tpra:123883809 253.832