Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme144187g00001 ATGAACGATGGTACCTACCGCGGGGGCGCTCAAGCATTTAGGCTCGACACACTTTTAAAACTTTCTGACGTAAAAGGAACAGACGGAAAAACAACATTGTTACATTTCGTGGTTCAAGAAATTATACGTTCTGAAGGAATAAGAGTAGTAAGAACCGAAAGAGCAAGCAGAAGCATTTCAAGCGTAGGAACCGATGATGTAGAATATGAAAACGAAAATTCAGAAGAACATTATCGTAGTCTTGGACTTCAAGTAGTTTCAAGCTTAAACAATGAACTCGAAGATGTTAGAAAAGCAGCATTAATAGACGGTGATGCATTGACCAGCACAGTTTTGAAACTCGGTCACTCGTTGGTTAAGACTCAGGAGTTTATGAACAATGAGCTTAAGAATTTGGAAGGGACTGAGTTTCAAAGTTGTTTAGAGACGTTTATGGATCATGCGAAAGGAGAGGTGATGTTTCTTGTTGAAGAAGAGAAAAGGATAATGGCTTTG 495 0.3919 MNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRVVRTERASRSISSVGTDDVEYENENSEEHYRSLGLQVVSSLNNELEDVRKAALIDGDALTSTVLKLGHSLVKTQEFMNNELKNLEGTEFQSCLETFMDHAKGEVMFLVEEEKRIMAL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme144187g00001 165 Gene3D Formin, FH2 domain 1 165 IPR042201 -
Trme144187g00001 165 PANTHER FORMIN-RELATED 1 165 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme144187g00001 165 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 164 - -
Trme144187g00001 165 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 165 IPR015425 -
Trme144187g00001 165 Pfam Formin Homology 2 Domain 1 164 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme144187g00001 Trme-Chr144187 12 506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme144187g00001 1 165 FH2 protein (formin) Gene Family AT5G54650 63.690 4.53e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme144187g00001 - - vvo:131606706 270.781