Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14397g00001 ATGGAGGAAATAAGTTCGACGGTCGCAGTGCCATTAACACTTGGGAATTTAATACAAAAGGAGTCAGTTATGACAAATCTTATGGCAAATACAGCAACAGTTTTAATATTAAATCCTGCTTCAATTGAGGGTTGTCAATCCTTTTCTGTAGGAAGTGACGACAACGATGACGCAGATATTAGTCCACAACGTAAAATATCAGTGTCTCTAGAGGTTAAGGAGAATCATCAAGTTGCAGCTGAAACGGTCGCAGAAATGGTTCTTGAAAGTGACAGTAACGGAAGAAATGATGATGAATTCATGATAGCTAATGATTTTCCGCGTATACATAATCCATCCTCTCAATCAGATGTTGGTAACAAAATCGGTTCTTTTAAGGAGGAGTCTGCAATTTCAAGGACTAATTTGTCAGAAATGAACACACCGAATACCGTCATGGTTGATGGTAGTAACCATGATCAGTCTGTTTTGTACGAGTCCGTGAAKAACATGGCTTCTGTTGTGATGAAACATGAGAGTAAGTCAGATGGTTCTGATACAAAACCAATTGATGTAGTTCATGAGATGCCAGAGAAGCAAACATGCACAACAAACTGTGATAATGCTTTGGAATTGAGCGATACTCCTCTTTTTGGTTTCTCGTCGGTTTGTGGAAGGAGACAAGAAATGGAAGATGCTATTGTTGTTAAGCCTCAACTTTTTCAAGTACCTTCAATGATGCTAATGGATGGCCATGTGAATGAAAACACAAAACACTCACTAGCACACCTTTTTGGTGTCTTTGATGGACATGGGGGAAGTCAG 804 0.393 MEEISSTVAVPLTLGNLIQKESVMTNLMANTATVLILNPASIEGCQSFSVGSDDNDDADISPQRKISVSLEVKENHQVAAETVAEMVLESDSNGRNDDEFMIANDFPRIHNPSSQSDVGNKIGSFKEESAISRTNLSEMNTPNTVMVDGSNHDQSVLYESVXNMASVVMKHESKSDGSDTKPIDVVHEMPEKQTCTTNCDNALELSDTPLFGFSSVCGRRQEMEDAIVVKPQLFQVPSMMLMDGHVNENTKHSLAHLFGVFDGHGGSQ 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14397g00001 268 Gene3D - 199 268 IPR036457 -
Trme14397g00001 268 SUPERFAMILY PP2C-like 209 267 IPR036457 -
Trme14397g00001 268 ProSitePatterns PPM-type phosphatase domain signature. 257 265 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14397g00001 Trme-Chr14397 606 1409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14397g00001 151 268 PP2C-type Phosphatase Gene Family AT5G57050 39.496 1.82e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14397g00001 K14497 - gmx:100812974 200.29