Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14388g00001 GACGGGGTAAGTGATGGACAGTTCTACCAAGTTTTGCTGTATGAACTTGACGCCATCCGTAAGGCTTGTGCGTCTTTGGAACCAAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGGAATCACACTAAACTCTTCCCAAACAATCACGACGACAGAAACAGCACTGATACGAGTGGGAATATCTTACCTGGTACTGTGGTGGACTCAAATATCTGTCATCCTACTGAATTCGATTTCTATTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCAGCACACTATCATGTCCTCTGGGATGAGAACAATTTCAGTGCAGATGAGATTCAGTCTCTAACTAACAACTTATGCTACACCTATGCAAGATGTACGCGGTCTGTTTCTGTAGTACCTCCAGCATACTATGCTCATCTGGCAGCCTACAGAGCTCGATGCTATATGGAACCCGATCATCCAGAGATCACTAAACTCCGAGGTGCAAGATCAAAAGATAGGGCTGTTAGGCCACTTCCTGCATTGAAAGAGAACGTGAAGAATGTAATGTTTTATTGCTAA 567 0.4356 DGVSDGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRNHTKLFPNNHDDRNSTDTSGNILPGTVVDSNICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARCYMEPDHPEITKLRGARSKDRAVRPLPALKENVKNVMFYC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14388g00001 188 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 153 - -
Trme14388g00001 188 SMART Piwi_a_2 1 152 IPR003165 GO:0003676
Trme14388g00001 188 ProSiteProfiles Piwi domain profile. 1 152 IPR003165 GO:0003676
Trme14388g00001 188 Gene3D - 1 188 IPR036397 GO:0003676
Trme14388g00001 188 Pfam Piwi domain 1 151 IPR003165 GO:0003676
Trme14388g00001 188 SUPERFAMILY Ribonuclease H-like 1 153 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14388g00001 Trme-Chr14388 309 1502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14388g00001 1 188 Eukaryotic Initiation Factors Gene Family AT5G43810 79.695 2.02e-108 330