Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1438803g00001 ATGGATCTTTTCAAGGAGTGTATGAAGATTGTTGAGAGTTGTCTTACAGATGCTAACCTGGACAAGAGTAAGGTTGATGATGTTGTCCTTGTTGGTGGGTGTTCTCGGATTCCTAAAGTGCAGCAACTGTTACAAGACTTTTTCATGGGGAAGGAGTTGTGCAAGAGCATTAACCC 176 0.4261 MDLFKECMKIVESCLTDANLDKSKVDDVVLVGGCSRIPKVQQLLQDFFMGKELCKSINP 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1438803g00001 59 SUPERFAMILY Actin-like ATPase domain 2 59 IPR043129 -
Trme1438803g00001 59 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme1438803g00001 59 Gene3D - 1 59 - -
Trme1438803g00001 59 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme1438803g00001 59 PRINTS 70kDa heat shock protein signature 57 59 - -
Trme1438803g00001 59 PANTHER HEAT SHOCK PROTEIN 70KDA 1 59 IPR013126 GO:0005524|GO:0140662
Trme1438803g00001 59 Pfam Hsp70 protein 2 59 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1438803g00001 Trme-Chr1438803 1 176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1438803g00001 1 59 Calmodulin-binding Proteins AT5G02500 77.966 1.53e-27 100