Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14380g00001 ATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCTATAGCCAATGATGATATTTTACCTATTCTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTTGCTACCCTTTTTACTGCTTTCCTATGTATTGGGTGTGTCATCATTGGGAATCTTGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCGCTTCTAGGAGCATTACTTTGCGTAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTTTCTTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGACGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGTAGCCTTCGGTCGCTAGGAGGTGATTTCATCACCATTGATCGGCCCATTGGCATTAATAGGCCTATTAAGAGGAAAGGGGGTGAGGTAGTTATTGAGAGTGGCTGGAAAGGCATGCGTGAATTTTGCTGA 606 0.4538 MGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGGDFITIDRPIGINRPIKRKGGEVVIESGWKGMREFC 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14380g00001 201 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 1 164 IPR004842 GO:0006811|GO:0015377|GO:0016020
Trme14380g00001 201 Pfam Amino acid permease 2 149 IPR004841 GO:0016020|GO:0055085
Trme14380g00001 201 Gene3D Amino acid/polyamine transporter I 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14380g00001 Trme-Chr14380 70 1403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14380g00001 1 167 Inorganic Solute Cotransporters AT1G30450 89.820 4.44e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14380g00001 K14427 - pvu:PHAVU_009G216800g 328.176