Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14370g00001 ATGGGTTTCCGTTTACAGTCTATTCTAAGGGCATCAGTATCTGCTAGACAAAAATCTGGAGAATTACCAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGGTTCCAATATCAYACTTGAACCAACCATTGTTTCAAGACTTGTTGAATCAAGCTGAAGAAGAGTTTGGATATGATCATCCAACAGGTGGCCTCACCATTCCTTGCACAGAAGATGTCTTCCAACGTATAATTTCTAGTTTGAATGGGCTATAA 270 0.4 MGFRLQSILRASVSARQKSGELPKGYVAVYVGEKQKRFVVPISXLNQPLFQDLLNQAEEEFGYDHPTGGLTIPCTEDVFQRIISSLNGL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14370g00001 89 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
Trme14370g00001 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14370g00001 Trme-Chr14370 113 382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14370g00001 21 88 Calmodulin-binding Proteins AT3G43120 45.588 2.18e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14370g00001 K14488 - gmx:100816803 137.887