Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143674g00001 ATGGGATCTAAGGATAGCAATGACTCGATGGTGGCGATTCAGCTAACTGTTGATTTGAAACCTGATTTGCCAAGAGAAGCAGAGAGAATTAAGAAGTGCAAGGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTATGG 221 0.4299 MGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYG 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143674g00001 74 Pfam Protein phosphatase 2C 12 72 IPR001932 -
Trme143674g00001 74 Gene3D - 1 74 IPR036457 -
Trme143674g00001 74 PANTHER PROTEIN PHOSPHATASE 8 71 IPR015655 GO:0004722|GO:0006470
Trme143674g00001 74 ProSiteProfiles PPM-type phosphatase domain profile. 1 74 IPR001932 -
Trme143674g00001 74 SUPERFAMILY PP2C-like 11 71 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143674g00001 Trme-Chr143674 1 317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143674g00001 1 74 PP2C-type Phosphatase Gene Family AT1G03590 89.189 1.73e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143674g00001 - - tpra:123883032 154.451