Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143666g00001 ATGCTTTTAGCACTCTCCGGCGCCGGAGTTGGACTCTCAATCCCGCCGGAAAACACAGCAGCACCGTTAAACCTTAGTTCTCCGATGGGTACTAGTAGAAAAAGATTCAGAACGAAATTCACACAAGAACAAAAGGAAAAGATGCATGAATTTGCTGAAAAAGTTGGGTGGAAGATGCAGAAAAGAGATGAAGAAATGGTGAATGGATTTTGCAATGATGTTGGTGTTGATAGAAGTGTTCTTAAAGTTTGGATGCATAATAATAAGAACACTTTGGRAAGAAAATTATCAGATCATGTTAATGGTAACGGCGCCGCCGTGGGAACCGCCGTTGACGGTGGCTCCGGTGTTGGTTTTAGTGTTCATGAGAATGATAATAATGGGACTAATGTTGCTGCTTGTGGTACTACTAATGGGTCGTCTTCTTCTTCTTGA 435 0.4207 MLLALSGAGVGLSIPPENTAAPLNLSSPMGTSRKRFRTKFTQEQKEKMHEFAEKVGWKMQKRDEEMVNGFCNDVGVDRSVLKVWMHNNKNTLXRKLSDHVNGNGAAVGTAVDGGSGVGFSVHENDNNGTNVAACGTTNGSSSSS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143666g00001 144 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 27 92 - -
Trme143666g00001 144 FunFam Zinc-finger homeodomain protein 2 21 94 - -
Trme143666g00001 144 MobiDBLite consensus disorder prediction 118 144 - -
Trme143666g00001 144 NCBIfam homeobox domain, ZF-HD class 33 90 IPR006455 -
Trme143666g00001 144 Gene3D - 23 94 - -
Trme143666g00001 144 SUPERFAMILY Homeodomain-like 24 94 IPR009057 -
Trme143666g00001 144 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143666g00001 Trme-Chr143666 8 442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143666g00001 1 92 ZF-HD Transcription Factor Family AT3G28920 59.783 9.76e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143666g00001 - - adu:107486720 159.458