Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143450g00001 CGTTGCACTCGGTCTATTTGTGTCTCTCCTTTCCTCCGACAAGCACCAGAGCACCGTCTTCCTGCTGCCATTGACGATGGGTTTGCAACGCTTCAGTGGCTTCAATCAGTTGCTAGGGGAGACGCCTGTGACCCATGGCTTGAGGAACACGGTGACTTCAACAAAGTTTTCCTCATAGGAGATAGCTCGGGGGGAAACTTGGTCCACGAAGTAGCAGCTAGAGTCGGTTCGGTCGACCTGAGCCCAGTTCGACTCGTTGAAGCAATTCCAATCCATCCTGGATTTGTCAGATCAATTCGAAGCCGGTCCGAAAATGAAATGCCACAATCACCATTTCAAACATTGGACATGTTGGACAAATTTTTGAGTTTGGCACTATCAATTGGGAGCAACAAGGACCACCCCTTCACATGCCCGATGGGCACAGCCGCACCACCCCTTGACGGCCTAAAATTGCCGTCATTTCTTCTTTGCATAGCTGAAAAAGACTTGATGATGGATACAGAAATAGAGTATTATGAAGCCATGAAGAAGGCCAATAAAGAAATAGACATGTTTGT 560 0.4786 RCTRSICVSPFLRQAPEHRLPAAIDDGFATLQWLQSVARGDACDPWLEEHGDFNKVFLIGDSSGGNLVHEVAARVGSVDLSPVRLVEAIPIHPGFVRSIRSRSENEMPQSPFQTLDMLDKFLSLALSIGSNKDHPFTCPMGTAAPPLDGLKLPSFLLCIAEKDLMMDTEIEYYEAMKKANKEIDMFV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143450g00001 187 Gene3D alpha/beta hydrolase 3 187 IPR029058 -
Trme143450g00001 187 SUPERFAMILY alpha/beta-Hydrolases 6 184 IPR029058 -
Trme143450g00001 187 PANTHER ARYLACETAMIDE DEACETYLASE 5 180 - -
Trme143450g00001 187 Pfam alpha/beta hydrolase fold 3 184 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143450g00001 Trme-Chr143450 1 560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143450g00001 6 186 Carbohydrate Esterase AT3G63010 34.066 1.40e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143450g00001 - - lja:Lj0g3v0229819.1 313.923