Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14339g00001 ATGCAATTTGATGATCAAAACAGAGTGGAAAAAGCTAAAAGGCGTGCACTAGTAAATCAAACTGAAGCAAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAATATGAACATGGGAATCAGCTTCCTAATCTTGAGTCAAGGTTTTTCCAACTCGACTCGATGCATCCTGCTGTGTTCAAGGTTGGATTACGTTATATGGCCGGAGATATATCAGGAGTTGATGCTCGTTGTACCGAAATGCTTAGAGCGCTTCAGGATGCCATTATAGACTACTCCACTCCGCCTGAAAAAGTACTTATTAGGGATTTAACTGCAAAAATTAATAGTTATGTTTCATTTATTAGCGAATGCCGACCGCTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTGAAGAGTCGAATTGCCAAGTTGTCCTTAAGTTATACTGATGCTGAGGCAAAAGCTGCTCTTTGTTCTGATATTGACCGATTCATTAATGAAAAAATAATTATTGCGGATAAGGTGATTGTTGGACATGCTATGACCAAAATTAGGGATGGAGATGTTCTTCTTACATATGGATTGTCTTGTGTTGTTGAGATGATTCTCTTATCTGCTCATG 607 0.3839 MQFDDQNRVEKAKRRALVNQTEARNRVELFRHLPQYEHGNQLPNLESRFFQLDSMHPAVFKVGLRYMAGDISGVDARCTEMLRALQDAIIDYSTPPEKVLIRDLTAKINSYVSFISECRPLSISMGNAIRFVKSRIAKLSLSYTDAEAKAALCSDIDRFINEKIIIADKVIVGHAMTKIRDGDVLLTYGLSCVVEMILLSAH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14339g00001 202 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 202 - -
Trme14339g00001 202 SUPERFAMILY NagB/RpiA/CoA transferase-like 54 202 IPR037171 -
Trme14339g00001 202 Pfam Initiation factor 2 subunit family 71 202 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14339g00001 Trme-Chr14339 1 1501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14339g00001 1 202 Eukaryotic Initiation Factors Gene Family AT5G38640 73.267 2.47e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14339g00001 K03680 - gmx:100778711 335.88