Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143255g00001 ATGGAAAATCAAATACCATTCACAGGAATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGAGCGTCTTTTAGTGGAGATAGTGAAAATGAGGCTGCGGAGCTTCAATTCCGTGGACAAAGAATATGGCTAGCTGCAATGGAGGAATTAATGTCTCAAGGAATGCAGAATGCAGAACAGGTTT 223 0.3901 MENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENEAAELQFRGQRIWLAAMEELMSQGMQNAEQV 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143255g00001 74 PANTHER NOTUM-RELATED 1 74 IPR004963 GO:0016787
Trme143255g00001 74 Pfam Pectinacetylesterase 1 74 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143255g00001 Trme-Chr143255 1 489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143255g00001 1 73 Carbohydrate Esterase AT5G26670 75.342 9.46e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143255g00001 K19882 - gmx:100786972 144.05