Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14315g00001 ATGGCTGTGAATCTTACGCAAGGAGCAATAGCGAGAATATGCAATAGTGACAATTTCTCTTTTATTAATAAATATAAGCCTGTGCTGCAAGTTGTCCATTCCCGCCATCCCAACATCCTTTGGCTGTCTGATGGTTCGGCAGGTTCGCTGTCTATTCCCGGAATTCTCTCCCCGAATTTGGAAGAGTTGATGACTTCCAGAAAGTTGCAGAAAAGCTCCGTTGTTAAACTCACTCGCTTCATCGTCGACAAACAAGTTCATAACGGCATAGTTATCCTTGACCTAGAAGTTATACTGGACAAATGTAAGCCGATTGGAGAACCAACCCTACTAACCGAAATTGCTCTTCCGCTACCAAATGTGGCTGACCTTCAGTTTTTCAACTCGAGAACCGAGAGAATGACCGTGAATCTGACGCAAGG 422 0.4431 MAVNLTQGAIARICNSDNFSFINKYKPVLQVVHSRHPNILWLSDGSAGSLSIPGILSPNLEELMTSRKLQKSSVVKLTRFIVDKQVHNGIVILDLEVILDKCKPIGEPTLLTEIALPLPNVADLQFFNSRTERMTVNLTQG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14315g00001 141 Gene3D - 3 112 IPR012340 -
Trme14315g00001 141 SUPERFAMILY Nucleic acid-binding proteins 1 106 IPR012340 -
Trme14315g00001 141 Pfam Replication factor-A protein 1, N-terminal domain 5 98 IPR007199 GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14315g00001 1 108 Core DNA Replication Machinery Family AT5G45400 34.426 1.16e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14315g00001 K07466 - vvo:131659223 98.9821