Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143106g00001 CAATCTGAAATTCATATACACCGTATATTATTGGTTGCTCATTTTAAGATTTGCTTTCAGATTCTTGTTGGTCCATCTGATTGGGAAGATTTTTCCAAAGGAAAGGAAGGATCTACGGCATATAGGATTCACAATCTGCCACAAGATGATGGTCCCGGAGTTTATGAGCTTGGAGTAGCTGTAACAACTAGCAGTTTGGGGCGTGAAATTTTCAAGCTTACAACCGACCCTCGTCGAGTAGTTGTGGTTTATCTCGGAGAAGCTGGCAATGTGAAAACAAGACTCCAATGTTATGGTAGAGATGGAGCTCATTTGGATGGGCTCCTGTAA 330 0.4182 QSEIHIHRILLVAHFKICFQILVGPSDWEDFSKGKEGSTAYRIHNLPQDDGPGVYELGVAVTTSSLGREIFKLTTDPRRVVVVYLGEAGNVKTRLQCYGRDGAHLDGLL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143106g00001 109 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 20 107 IPR038909 GO:0003677|GO:0006355
Trme143106g00001 109 Pfam GIY-YIG domain-containing protein 19 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143106g00001 Trme-Chr143106 134 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143106g00001 19 105 HRT Transcription Factor Family AT5G56780 49.425 8.94e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143106g00001 - - cave:132166633 127.487