Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14306g00001 TTCAAAAACAGAAAAAACATGGCAGAGTTAGTTGGTGGAGCATTTCTTTCATCGTTCTTTCAAGTGGCTCTTCAGAAGTTGTCTTCTAATGATTTCATAGACTATTTCCGTAGAGGCAAACTTGACGACACACTGCTGGAGAAACTTCAAGTTACACTCAATTCTATCGACCATGTGCTTGAAGAAGCAGAGACAAAGCAGTACCAAAACACATACGTGAAGAAGTGGCTTAGTGATCTTAAACATGTTGTGTATGAAGCAGATCAACTTTTGGATGAGATAGCAACATGCACACCACACAAGAAGCTGAAAGTTGAATCTCAACCGGCTACAAGCAAGGTATTCGACTTCTTTTCATCTTTTACTAATCCATTTGAATCTAGGATCAAAGAATTGCTAGAGAAGTTAGAATTTCTTGCAAAGCAAAAGGATACGTTGGGGTTAAAACAAGACATTTGTGCAAGTAATGAAGGTGGAGTCAGTTGGAAGCCCTTAAAAAGATTGCCAACTACATCTTTGGTGGAAGAATCGAGCATATATGGTAGAGATGGTGACAAAGAGGAAGTAATCAAATTTTTACTTTCCGACATAGATGGTGGCAACCAGGTACCAATAATCAGCATAGTAGGGTTAGGTGGAATGGGAAAAACCACCCTTGCTCAGCTTGTGTACAATGACTACATGATCCAGAAGAAGTTTGAATTAAAAGCTTGGGTCTATGTTTCAGAAACTTTTAATGTTGTTGGACTTACTAAAGCAATTTTGAGGTCATTTCACTTTTCGGCAGATGGTGAAGATTTGAATCTACTCCAACATCAATTACAGCAGAGACTAACAGGCAAGAAATATCTGCTTGTTCTGGATGATGTCTGGAACGGGAGTGGCGAATGTTGGGAGCGCTTACTACTTCCTTTTAATCATGGATCTACTGGAAGTAAGATTGTTGTGACAACACGTGACAAAGAGGTTGCATCAGTCATGAAGTCCACCAAACTTCTTAATTTGAAGCAATTGAAGAGTAGTGAATGTTGGAGTATGTTTGTGAGACATGCTTTTCAGGGCACGAATGCGAGTGAATATCCAAATCTTGAATCAATTGGCAAGAAAATAGTAGAAAAGTGTGGAGGGTTGCCTTTAGCTGTAAAAACANTGGGGAATCTCTTGCGAAGAAAATTCTCTCAACGTGAATGGATTAAGATATTGGAGACAGATCTATGGCGTTTATCAGAGGGTGATAGTAACATTAACTCAGTACTGAAATTGAGTTTCCATCATCTCCCTTCCAATCTGAAGCGTTGCTTTTCTTATTGTTCCATATTCCCCAAAGGTTATATTTTTTGCAAGGGTGAATTAATCAAGCTTTGGATGGCAGAAGGTTTGTTGAAGTGCAGCAGAATTGACAAAAGTGAAGAAGAGTTAGTGATTTAG 1428 0.388 FKNRKNMAELVGGAFLSSFFQVALQKLSSNDFIDYFRRGKLDDTLLEKLQVTLNSIDHVLEEAETKQYQNTYVKKWLSDLKHVVYEADQLLDEIATCTPHKKLKVESQPATSKVFDFFSSFTNPFESRIKELLEKLEFLAKQKDTLGLKQDICASNEGGVSWKPLKRLPTTSLVEESSIYGRDGDKEEVIKFLLSDIDGGNQVPIISIVGLGGMGKTTLAQLVYNDYMIQKKFELKAWVYVSETFNVVGLTKAILRSFHFSADGEDLNLLQHQLQQRLTGKKYLLVLDDVWNGSGECWERLLLPFNHGSTGSKIVVTTRDKEVASVMKSTKLLNLKQLKSSECWSMFVRHAFQGTNASEYPNLESIGKKIVEKCGGLPLAVKTXGNLLRRKFSQREWIKILETDLWRLSEGDSNINSVLKLSFHHLPSNLKRCFSYCSIFPKGYIFCKGELIKLWMAEGLLKCSRIDKSEEELVI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14306g00001 475 Gene3D - 31 143 - -
Trme14306g00001 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 437 IPR027417 -
Trme14306g00001 475 Coils Coil 129 149 - -
Trme14306g00001 475 Pfam NB-ARC domain 184 403 IPR002182 GO:0043531
Trme14306g00001 475 FunFam Probable disease resistance protein At1g61300 165 331 - -
Trme14306g00001 475 Gene3D - 337 422 IPR042197 -
Trme14306g00001 475 PANTHER DISEASE RESISTANCE PROTEIN RP 47 464 IPR044974 GO:0006952
Trme14306g00001 475 Gene3D - 165 334 IPR027417 -
Trme14306g00001 475 PRINTS Disease resistance protein signature 374 388 - -
Trme14306g00001 475 PRINTS Disease resistance protein signature 277 291 - -
Trme14306g00001 475 PRINTS Disease resistance protein signature 205 220 - -
Trme14306g00001 475 Pfam Rx N-terminal domain 15 107 IPR041118 -
Trme14306g00001 475 Gene3D - 423 474 IPR036388 -
Trme14306g00001 475 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14306g00001 Trme-Chr14306 2 1523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14306g00001 206 391 WRKY Transcription Factor Family AT5G45050 27.604 1.26e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14306g00001 - - mtr:11414856 727.243