Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme143035g00001 GCTGGTGGAAATATTTCACATTATGTTGCTGTTAAAGCTGTTCAAAATAATGGGTTTTGTCCTGTGAAAATTAAAGGGGTTATGCTTATTCATCCTTATTTTGGGAGTGAGAAAAGGACTGAGAAAGAGATGGAGGAAGAAGGTTTTGARGAWGTTAGAATGAATGATATGTTTTGGARATTGAGTTTGCCTGAAGATTCGAACCGCGATTTTTATGGTTGTAATTTTGAGAAAGATGARGTTTCTGAGAGTGTTTGGTTKAAGTTTCCTGCTGTTGAGGTTTATGTTGCTGGGAAGGATTTTTTGAAGGAAAGAGGTGTTATGTATGCTGAATTTGTGAAGAAGAAAGGAGTGAAAGTTGTTAAGGTTGTGGAAGCTGAAGAAGAGAAACATGTTTTTCATGTTTTTTATCCTGAATCTGATGCAACTAGGTTGCTTCAAAA 443 0.3544 AGGNISHYVAVKAVQNNGFCPVKIKGVMLIHPYFGSEKRTEKEMEEEGFEXVRMNDMFWXLSLPEDSNRDFYGCNFEKDEVSESVWXKFPAVEVYVAGKDFLKERGVMYAEFVKKKGVKVVKVVEAEEEKHVFHVFYPESDATRLLQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme143035g00001 147 Gene3D alpha/beta hydrolase 1 147 IPR029058 -
Trme143035g00001 147 Pfam alpha/beta hydrolase fold 1 134 IPR013094 GO:0016787
Trme143035g00001 147 PANTHER ARYLACETAMIDE DEACETYLASE 1 137 - -
Trme143035g00001 147 SUPERFAMILY alpha/beta-Hydrolases 1 143 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme143035g00001 Trme-Chr143035 121 563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme143035g00001 1 136 Carbohydrate Esterase AT5G16080 31.206 1.09e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme143035g00001 - - vvo:131596267 225.328