Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1430335g00001 ATGATTTTGTATGAGGTTCTTAGGTTATACCCACCAGCAATAGCGCTATCTCGAACTGCTCACAAAGATGTGAAACTCGGAAGCATATCATTACCTGTCGGAGTGCAGCTTATCTTATCGGTAATTTTGGTTCACCATGACGTAGAACTATGGGGTGATGATGCTAAG 168 0.4226 MILYEVLRLYPPAIALSRTAHKDVKLGSISLPVGVQLILSVILVHHDVELWGDDAK 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1430335g00001 56 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 56 - -
Trme1430335g00001 56 Gene3D Cytochrome P450 1 56 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme1430335g00001 56 Pfam Cytochrome P450 1 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme1430335g00001 56 SUPERFAMILY Cytochrome P450 1 55 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1430335g00001 Trme-Chr1430335 8 175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1430335g00001 1 55 Cytochrome P450 AT3G14680 65.455 2.08e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1430335g00001 - - lja:Lj4g3v0227820.1 93.9745