Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14273g00001 CTTAATAAGGTGAGTGACCCTCAAATTAAGGAGTTTATTGAGAAATGCCTGGTTCCAGCATCCGAGAGATTGTCTGCAGAGGAACTTCTTAAAGACCCATTTCTACAAATTGATAGTCAAAAGGATCCATTCCCGTCTCCTGTTAAAACTCGAAGATCTACGTCAAGGGCTGGATCTATGGACATGGATGCTGACTACAAAAATTTTTCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNACAGTTTATCAAGTCCAAAGGACTAATAAGAACAATGAGTTTAGGTTAAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCGGATACAAGTGGTCGAGTGAGGAATATACATTTTCTCTTTTACCTTGATACAGACACTGCAGTCTCGGTGGCCTCAGAGATGGTTGAACATTTGGAGCTGGCGGATCATGATGTGGCTTTCATTGCTGAGCTTATTGATTACTTGATAATGAAACTTGTTCCTTGGTGGAAACCTTCGCCTGATCATAACTCAACTGGAGGAACAAGTCTTTGTAGTGGTTCTACAAATGTCGATAGCCAAACGGCATGCCCTTGGAGTTCTATCTTAACAAGTGTTTCCTCAGAAACAGTTAGTGGTCAAGACGTCTTTTCCGGGTTTAACACAATTCCTAAAGATGGTTTAGAGACACCTGGAAAGGCCTGTTTTTACAAAAATGCCGATAATGCTATTTTCAAGGGTGCCTTAGATTCTACTCCTAGTTTGGTTAACTCAGAAGATCGATATTCACGAGGATCAGGAGCTTCTGAGATAGCTGTTGATGATGTTTCAATGAAAAATGCTAACTGTCATGATTCAAAATTTCTTGGTGTTGGATATTTTAAATGCCTAGCAAGGTCGATAACTGGGCTTGAAGTTGGTGATGCGTATTTCGAAGATTGTAAATTGCAGGCAGCAGATTACAATATTGGGGGAAGCACTGTGAACTCAGAATTATCAAATGCTGTGAGCTTGTCAAGTAGCTGTTGTTCTATGTCTTCAACTGAAAAGGATATTGATCTCGAGCTAAAAAATGAACTCGAGGCAATTGAGTCACAATATCAGCATTGGATTGAGGAACTCACTAGAATGAAATTGGAGGCATTGGAAG 1159 0.3848 LNKVSDPQIKEFIEKCLVPASERLSAEELLKDPFLQIDSQKDPFPSPVKTRRSTSRAGSMDMDADYKNFSXXXXXXXXXXXXXXTVYQVQRTNKNNEFRLKGTKNDDNSVSLTLRIADTSGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIMKLVPWWKPSPDHNSTGGTSLCSGSTNVDSQTACPWSSILTSVSSETVSGQDVFSGFNTIPKDGLETPGKACFYKNADNAIFKGALDSTPSLVNSEDRYSRGSGASEIAVDDVSMKNANCHDSKFLGVGYFKCLARSITGLEVGDAYFEDCKLQAADYNIGGSTVNSELSNAVSLSSSCCSMSSTEKDIDLELKNELEAIESQYQHWIEELTRMKLEALE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14273g00001 386 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 110 166 IPR024678 GO:0004674|GO:0005524
Trme14273g00001 386 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 320 - -
Trme14273g00001 386 Gene3D - 108 181 - -
Trme14273g00001 386 Coils Coil 363 383 - -
Trme14273g00001 386 MobiDBLite consensus disorder prediction 40 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14273g00001 Trme-Chr14273 2 1530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14273g00001 1 174 MAP Kinase Kinase Kinase AT1G49160 46.597 6.37e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14273g00001 K08867 - gmx:100272197 407.912