Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1424g00001 TTCAATTCAACCTTGCGTCAAGGAAGCGTTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTTAGCTTCAATCAGATTGCACTATTTGAGGGAAAGGTTTCAAGTGGCAATGGTGAACAAGTTCTGAGTCGGGATATATACAGACTCGGGCAATTTTTTGATTTCTTCCGGATGATGTCCTTTTACTTCACAACAGTTGGATACTACTTTTGTAGCATGTTAACAGTGCTGACAATGTATGCCTTTCTTTATGGAAAAACGTATTTGGCACTCTCTGGTGTTGGTGAAACAATTGAAGAAAGGGCAAAGATAACCACAAACATTGCTCTGAGTGCTGCTTTGAGTACACAGTTTCTCTTCCAAATTGGTATCTTCACTTCTGTGCCAATGGTCTTGGGCTTCATTCTTGAACAAGGCTTCTTGAGGGCAGTTGTCAATTTTGTCACAATGCAGTTTCAGCTCTGCACTGTTTTTTTAGCTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGTGTTGCAAGGTATCAAGCGACTGGCCGGGGGTTTCTCGTCTGCCATATCAAATTTTCCGAAAATTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTAA 642 0.4019 FNSTLRQGSVTHHEYIQVGKGRDVSFNQIALFEGKVSSGNGEQVLSRDIYRLGQFFDFFRMMSFYFTTVGYYFCSMLTVLTMYAFLYGKTYLALSGVGETIEERAKITTNIALSAALSTQFLFQIGIFTSVPMVLGFILEQGFLRAVVNFVTMQFQLCTVFLAFSLGTRTHYFGRTILHGVARYQATGRGFLVCHIKFSENYRLYSRSHFVKG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1424g00001 213 Pfam 1,3-beta-glucan synthase component 1 213 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Trme1424g00001 213 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1424g00001 Trme-Chr1424 238 2813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1424g00001 1 213 Cell Wall Biosynthesis AT3G07160 81.690 1.39e-119 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1424g00001 K11000 - gmx:100787540 387.111