Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14236g00002 CTTATTTTGGAGAGGCTGACTGCTAATAATCATCTTGACAGCTGCGTATCTATCTACACAGAGGTTCGGACCCTTAACTTCCAAGCAACATTTCAAGCACTTGATTTCAATGACCTCGAGACAACGACGCTATCCGAATTTGATAGTTTCCAAAGCATTGAGAGCTGCATTGAGAAATGGAGTGATTATTTGGAATATGCTGTGAAGCATCTACTAGAGTTGGAATATAGAGCCAGCAATGCTGTATTTAACAAAGAAATAGTTGGCTTAGATGTATCAAATGAATGTTTTGCCAAGACTGTAGTGAGATCTGCATTATTGCAGGGCTTCGTCAAATTTGCAAACACTATCACCAAAGGAAAGAAAGAAGCAATCAAGCTCTTAAAGCTGTTGAACATTTTTGCATCTCTCAACAAATTACGGGTGGATTTCAACAGATTCTTTGGTGGGAAAAACTGTGTGGAGATTCAATCTCAGATGAGAGATTTCATCAAGAAGGTGATTAATGAAGCTTGTGATATCTTCTGGGAACTGCCTACTCAAGTTGAGTCTCAAAGGCAGTCTACACCTCCTGCAGATGGAGGCATTCCAAGGCTTTTAAGTTTTGTCGTTGATTACTCCAATGAGTTGTTAGGTGAATACTACAGACCTATATTGACTCAGATTCTGGAGATTCAATGGAGTTGGAATAATAATCATACCCACAAGGAGGGTCTGGAGAAGCAGCGGCAGCAATTCCTGTTGAACCAGGAGCTTCACTATAAGAAGATAATAAAGGCACTTGAGCTTAATATATAG 798 0.3972 LILERLTANNHLDSCVSIYTEVRTLNFQATFQALDFNDLETTTLSEFDSFQSIESCIEKWSDYLEYAVKHLLELEYRASNAVFNKEIVGLDVSNECFAKTVVRSALLQGFVKFANTITKGKKEAIKLLKLLNIFASLNKLRVDFNRFFGGKNCVEIQSQMRDFIKKVINEACDIFWELPTQVESQRQSTPPADGGIPRLLSFVVDYSNELLGEYYRPILTQILEIQWSWNNNHTHKEGLEKQRQQFLLNQELHYKKIIKALELNI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14236g00002 265 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 265 IPR004140 GO:0000145|GO:0006887
Trme14236g00002 265 Gene3D Exocyst complex component Exo70 1 265 - -
Trme14236g00002 265 SUPERFAMILY Cullin repeat-like 2 264 IPR016159 -
Trme14236g00002 265 Pfam Exo70 exocyst complex subunit 59 265 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14236g00002 Trme-Chr14236 732 1529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14236g00002 2 265 EXO70 exocyst subunit family AT4G31540 50.566 4.73e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14236g00002 K07195 - dcr:108207967 446.432